Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891025.1_cds_XP_016445725.1_40658
CDS Infomation

[gene=LOC107770909] [db_xref=GeneID:107770909] [protein=WD repeat-containing protein 44-like isoform X2] [protein_id=XP_016445725.1] [location=complement(join(4513..5045,5311..5404,5501..5580,6093..6144,6244..6401,6519..6609,6702..7646))] [gbkey=CDS]
Sequence

ATGGACTTACACGTAAATGATGGAGAAGATCCAGTGACTGTATATGGGAATTCTGATTTA
TCTAGTTGTGAGATTGAACGGATTATGGAGGATAGTGAGGCTATGTTGCCAACCTCAATT
CTTAAAGACGAATTTCCTTCTGATTTGCCTGTTGGAGTTTTGGGTTCATATAAAGAGTTG
GATTCAAATGAGACATTTCTTTTTCGGAATGGTAATCTACTTGGTGGAAGCGACTGCAAT
GTACATAATCTGGCTGAGAATAGCCACAGAACTGTTAAATTGGAACGACAGTTAATGTCT
AGTGAGCCCGAGGACTCATATATGTCCCCCAAAATTCAGCAAATTGGACAGCGGGAATTA
GAGGTCAGTGGATATGCTGGGAGGAAACTGAACCGGGTCAAGAGCCGTTTGTTAAGTAAA
TTGCGATCACTGACGTGCATTGTAAATGGCAAAGGGAGAGGTAACAATGTGAAGGCCGAC
ATCAGCTCCAGCCTTGTTCAAAGGTCTAGATTTCAGAAGGTTAAGGTTCACCACCGCAAG
AAGCGCTTAAAGGAACTCTCCGCTCTTTTTGTGGAGCAAGATATCCAGGCTCATAAAGGT
TCAATCTTAACTATGAAATTCAGTCTTGATGGGCAATACTTAGCCAGTGCTGGTGAAGAT
AAGATTTTGCGTGTATGGAAAGTGGTGGAAGACGAGAGATCCAACAAAATTGACATTCCA
GAGTTGGATCCGTCTTGCATGTACTTCTCGATGAACCATCAATCCCAACTGTCTCCTTTG
GTGACAGAGAAAGAGAGAATCAATAAATTGAGGGGCCTAAAGAAAACAACAGAATCGTCT
TGTGTCATTTTCCCTCCTAAGGTCTTTCGGATTTTGGAAGAACCACTGCATGTGTTCCAA
GGACATAGTGGGGAGATATTGGATGTTTCATGGTCAAAGAATAACTATTTGCTTTCATCA
TCAACTGACAAAACTGTTCGTCTGTGGCAAGTTGGATGTGATAAATGCCTCAAAGTTTTT
TCACATAGTAATTATGTGACTTCCATACAATTTAATCCAGTAAATGATGACTACTTCATC
AGTGGTTCATTAGATGGAAAAGTTCGCATTTGGGCGATTAATAGCTGTCAAGTTGTGGAT
TGGAAAGATATAAGAGACATTGTGACTGCTGTATCGTACCGTCCTGATGGGAAGGGTGGG
ATTATTGGCTCTATGGCAGGGGCGTGTTGCTTCTTTAGTTTAATAGATCACAAGATCCAA
CTGGAGGAGCAGATGTCATTGGGCAGTAAGAAGAAGTCACTTTGCAAAAGAATTACTGGT
TTTCAGTTCCTACCAGAAGACCCAACTAAAGTAATTGTTACTTGTGCTGACTCCCAAGTA
AGAATCCTTAGTGGGATCAATGTGATCGGCAAGTGCAGAGGCCTAAGAAATGCAGGAAGC
CATCTCTCTGCTGCTTTCACCTCGGATGGGAAGCATATTATCTCTGCGTCTGAAGATTCT
AATGTCTATCTATGGAACTTCCACATTCCAGAAGAGTCTTCTGTGTCCCAACCTGGAGCA
GTGAGATCATTTGAGTTCTTCAATGGCGATGCGACCATTGCAATACCTTGGTCTGGTTTG
AAAAATGTCAACCAGGAAAACCGGTGTCACTCACAAGGACTAAGTCAAAGCTTAACAAAT
TTCCCGTTCCCTTCTTCTCCTTGGTTCACTTTAGGACAAGAGTTGTTCTTAGAGGCAATT
CCCAAGGGATCTGCAACCTGGCCTGAAGAGAAGCTCCCTGTGTCACATCCTCGGCCTGTG
CCTTCTGCAATGTGTAAATCTCATTACAAGTTTCTGAAACGTTCTTGCCAGAGTTCATCC
CGTTCTCATGCCTGGGGTTTAGTTATTGTTACTGCAGGCTATGATGGGCGAATAAGGTCA
TTTCATAATTATGGACTGCCTTCGCCAGTTTGA

Peptide Sequence

PEP ID

XP_016445725.1
PEP Infomation

PREDICTED: WD repeat-containing protein 44-like isoform X2 [Nicotiana tabacum]
Sequence

MDLHVNDGEDPVTVYGNSDLSSCEIERIMEDSEAMLPTSILKDEFPSDLPVGVLGSYKEL
DSNETFLFRNGNLLGGSDCNVHNLAENSHRTVKLERQLMSSEPEDSYMSPKIQQIGQREL
EVSGYAGRKLNRVKSRLLSKLRSLTCIVNGKGRGNNVKADISSSLVQRSRFQKVKVHHRK
KRLKELSALFVEQDIQAHKGSILTMKFSLDGQYLASAGEDKILRVWKVVEDERSNKIDIP
ELDPSCMYFSMNHQSQLSPLVTEKERINKLRGLKKTTESSCVIFPPKVFRILEEPLHVFQ
GHSGEILDVSWSKNNYLLSSSTDKTVRLWQVGCDKCLKVFSHSNYVTSIQFNPVNDDYFI
SGSLDGKVRIWAINSCQVVDWKDIRDIVTAVSYRPDGKGGIIGSMAGACCFFSLIDHKIQ
LEEQMSLGSKKKSLCKRITGFQFLPEDPTKVIVTCADSQVRILSGINVIGKCRGLRNAGS
HLSAAFTSDGKHIISASEDSNVYLWNFHIPEESSVSQPGAVRSFEFFNGDATIAIPWSGL
KNVNQENRCHSQGLSQSLTNFPFPSSPWFTLGQELFLEAIPKGSATWPEEKLPVSHPRPV
PSAMCKSHYKFLKRSCQSSSRSHAWGLVIVTAGYDGRIRSFHNYGLPSPV

Transcript Sequence

Gene sequence data has not been registered.